SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02935

Signal sequence   MARWQRKASVSSPCGRSIYRFLSLLFTLVTSVNS

Length  34

Organism  Mus musculus (Mouse)

UniProt ID  P20239,

Motif  1..34



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02935.cif

Structure  SPKB02935.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3862.52624

Aliphatic index  88.82352941

Isoelectric point  12.059017

Charge (pH=7)   4.93485089

Topological polar surface area  1592.72

Aromaticity  0.117647059

Average rotatable bonds  3.676470588

Number of hydrogen bond donors  61

Number of hydrogen bond acceptors  54

X logP energy  -17.35612

Hydropathy 



Literature Information


Title  Structural characterization of native mouse zona pellucida proteins using mass spectrometry.

DOI  10.1074/jbc.M304026200,

Publication Year  2003

PubMed ID  12799386,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.