SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02929

Signal sequence   MVKASGIPIALGVWGLCWSLATVNS

Length  25

Organism  Oryctolagus cuniculus (Rabbit)

UniProt ID  P20058,

Motif  1..25



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  1QHU,

Predicted Structure ID  SPKB02929.cif

Structure  SPKB02929.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2574.09424

Aliphatic index  124.8

Isoelectric point  8.545189979

Charge (pH=7)   0.93571455

Topological polar surface area  934.54

Aromaticity  0.08

Average rotatable bonds  3.16

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  34

X logP energy  -6.8149

Hydropathy 



Literature Information


Title  N-terminal amino acid sequences of the hemopexins from chicken, rat and rabbit.

DOI  10.1016/s0006-291x(88)80540-0,

Publication Year  1988

PubMed ID  3421961,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.