SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02831

Signal sequence   MFHQVWAALLYLYGLLF

Length  17

Organism  Rattus norvegicus (Rat)

UniProt ID  P14630,

Motif  1..17



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02831.cif

Structure  SPKB02831.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2085.53714

Aliphatic index  143.5294118

Isoelectric point  7.534655153

Charge (pH=7)   0.087192562

Topological polar surface area  656.94

Aromaticity  0.294117647

Average rotatable bonds  3.647058824

Number of hydrogen bond donors  23

Number of hydrogen bond acceptors  23

X logP energy  2.8032

Hydropathy 



Literature Information


Title  A novel high-density lipoprotein particle and associated protein in rat plasma.

DOI  10.1016/0005-2760(90)90051-x,

Publication Year  1990

PubMed ID  2297521,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.