SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02813

Signal sequence   MAPDLSELAAAAAARGAYLAGVGVAVLLAASFLPVAES

Length  38

Organism  Zea mays (Maize)

UniProt ID  P13689,

Motif  1..38



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02813.cif

Structure  SPKB02813.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3615.20244

Aliphatic index  126.3157895

Isoelectric point  3.927550357

Charge (pH=7)   -1.998872696

Topological polar surface area  1377.16

Aromaticity  0.052631579

Average rotatable bonds  2.921052632

Number of hydrogen bond donors  47

Number of hydrogen bond acceptors  48

X logP energy  -12.20963

Hydropathy 



Literature Information


Title  Auxin-binding protein located in the endoplasmic reticulum of maize shoots: molecular cloning and complete primary structure.

DOI  10.1073/pnas.86.10.3564,

Publication Year  1989

PubMed ID  2542939,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.