SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02793

Signal sequence   MTPLRVFRKTTPLVNTIRLSLLPLAGLSFSAFA

Length  33

Organism  Escherichia coli (strain K12)

UniProt ID  P13036,

Motif  1..33



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  1KMO,

Predicted Structure ID  SPKB02793.cif

Structure  SPKB02793.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3632.41184

Aliphatic index  121.2121212

Isoelectric point  12.80742779

Charge (pH=7)   3.997679332

Topological polar surface area  1364.57

Aromaticity  0.090909091

Average rotatable bonds  3.454545455

Number of hydrogen bond donors  49

Number of hydrogen bond acceptors  47

X logP energy  -10.42209

Hydropathy 



Literature Information


Title  Genetics of the iron dicitrate transport system of Escherichia coli.

DOI  10.1128/jb.170.6.2716-2724.1988,

Publication Year  1988

PubMed ID  2836368,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.