SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02774

Signal sequence   MNRNTPKARGASSLAMAVAMGLAVLTTAPATA

Length  32

Organism  Paracoccus denitrificans

UniProt ID  P12293,

Motif  1..32



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02774.cif

Structure  SPKB02774.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3144.71634

Aliphatic index  82.8125

Isoelectric point  12.51647815

Charge (pH=7)   2.997682643

Topological polar surface area  1305.22

Aromaticity  0

Average rotatable bonds  3.125

Number of hydrogen bond donors  46

Number of hydrogen bond acceptors  47

X logP energy  -17.49486

Hydropathy 



Literature Information


Title  Isolation and nucleotide sequence of the methanol dehydrogenase structural gene from Paracoccus denitrificans.

DOI  10.1128/jb.169.9.3969-3975.1987,

Publication Year  1987

PubMed ID  3114231,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.