SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02725

Signal sequence   MSALTSQPTSSGSSEKIPRLRGWRAKAAGVVLAALALTTGVAAPAPA

Length  47

Organism  Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei)

UniProt ID  P0DX29,

Motif  1..47



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02725.cif

Structure  SPKB02725.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4619.36294

Aliphatic index  91.70212766

Isoelectric point  12.24365703

Charge (pH=7)   3.999159421

Topological polar surface area  1902.98

Aromaticity  0.021276596

Average rotatable bonds  3.085106383

Number of hydrogen bond donors  68

Number of hydrogen bond acceptors  66

X logP energy  -24.15479

Hydropathy 



Literature Information


Title  Purification and properties of Amycolatopsis mediterranei DSM 43304 lipase and its potential in flavour ester synthesis.

DOI  10.1016/j.biortech.2010.11.074,

Publication Year  2011

PubMed ID  21145735,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.