SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02723

Signal sequence   MVRSMRSRVAARAVAWALAVMPLAGAAGLTMAASPAAVA

Length  39

Organism  Burkholderia plantarii

UniProt ID  P0DUB8,

Motif  1..39



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02723.cif

Structure  SPKB02723.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3854.67014

Aliphatic index  103.0769231

Isoelectric point  12.97714556

Charge (pH=7)   3.997971054

Topological polar surface area  1495.85

Aromaticity  0.025641026

Average rotatable bonds  3.076923077

Number of hydrogen bond donors  55

Number of hydrogen bond acceptors  52

X logP energy  -15.06002

Hydropathy 



Literature Information


Title  Cloning of the Pseudomonas glumae lipase gene and determination of the active site residues.

DOI  10.1128/aem.58.12.3787-3791.1992,

Publication Year  1992

PubMed ID  1476423,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.