SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02599

Signal sequence   MLRVLHRAASALVMATVIGLAPAVAFALA

Length  29

Organism  Pseudomonas sp. (strain SY-77)

UniProt ID  P07662,

Motif  1..29



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02599.cif

Structure  SPKB02599.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2934.64104

Aliphatic index  151.7241379

Isoelectric point  12.50011018

Charge (pH=7)   2.088886768

Topological polar surface area  1062.27

Aromaticity  0.034482759

Average rotatable bonds  3.172413793

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  37

X logP energy  -6.19566

Hydropathy 



Literature Information


Title  Molecular cloning and structure of the gene for 7 beta-(4-carboxybutanamido)cephalosporanic acid acylase from a Pseudomonas strain.

DOI  10.1128/jb.163.3.1222-1228.1985,

Publication Year  1985

PubMed ID  2993240,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.