SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02586

Signal sequence   MLGVLVLGALALAGLGFP

Length  18

Organism  Homo sapiens (Human)

UniProt ID  P07204,

Motif  1..18



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  7T4R,

Predicted Structure ID  SPKB02586.cif

Structure  SPKB02586.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1712.16674

Aliphatic index  178.8888889

Isoelectric point  6.099999998

Charge (pH=7)   -0.002015701

Topological polar surface area  549.23

Aromaticity  0.055555556

Average rotatable bonds  2.944444444

Number of hydrogen bond donors  18

Number of hydrogen bond acceptors  20

X logP energy  -0.6842

Hydropathy 



Literature Information


Title  Structure and expression of human thrombomodulin, a thrombin receptor on endothelium acting as a cofactor for protein C activation.

DOI  10.1002/j.1460-2075.1987.tb02448.x,

Publication Year  1987

PubMed ID  2820710,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.