SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02572

Signal sequence   MRTLWIMAVLLVGVDG

Length  16

Organism  Protobothrops flavoviridis (Habu) (Trimeresurus flavoviridis)

UniProt ID  P06859,

Motif  1..16



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02572.cif

Structure  SPKB02572.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1774.21284

Aliphatic index  158.125

Isoelectric point  6.338718596

Charge (pH=7)   -0.001572528

Topological polar surface area  635.04

Aromaticity  0.0625

Average rotatable bonds  3.5625

Number of hydrogen bond donors  23

Number of hydrogen bond acceptors  22

X logP energy  -1.54563

Hydropathy 



Literature Information


Title  Interisland evolution of Trimeresurus flavoviridis venom phospholipase A(2) isozymes.

DOI  10.1007/s00239-002-2400-7,

Publication Year  2003

PubMed ID  12612832,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.