SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02542

Signal sequence   MNSFSTSAFGPVAFSLGLLLVLPAAFPAP

Length  29

Organism  Homo sapiens (Human)

UniProt ID  P05231,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  8QY5,

Predicted Structure ID  SPKB02542.cif

Structure  SPKB02542.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2923.46274

Aliphatic index  104.4827586

Isoelectric point  6.099999998

Charge (pH=7)   -0.002015701

Topological polar surface area  987.2

Aromaticity  0.137931034

Average rotatable bonds  2.862068966

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  37

X logP energy  -7.1484

Hydropathy 



Literature Information


Title  Marked cell-type-specific differences in glycosylation of human interleukin-6.

DOI  10.1016/1043-4666(91)90018-9,

Publication Year  1991

PubMed ID  1883960,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.