SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02491

Signal sequence   MMKRNILAVIVPALLVAGTANA

Length  22

Organism  Escherichia coli (strain K12)

UniProt ID  P02931,

Motif  1..22



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  3HW9,

Predicted Structure ID  SPKB02491.cif

Structure  SPKB02491.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2266.83214

Aliphatic index  150.9090909

Isoelectric point  11.65177567

Charge (pH=7)   1.997685954

Topological polar surface area  859.96

Aromaticity  0

Average rotatable bonds  3.363636364

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  30

X logP energy  -5.95523

Hydropathy 



Literature Information


Title  Primary structure of major outer-membrane protein I (ompF protein, porin) of Escherichia coli B/r.

DOI  10.1042/bj2030033,

Publication Year  1982

PubMed ID  7049161,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.