SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02488

Signal sequence   MKPGGNTIVIWMYAVATWLCFGSTSGWSFTLEDNN

Length  35

Organism  Ricinus communis (Castor bean)

UniProt ID  P02879,

Motif  1..35



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02488.cif

Structure  SPKB02488.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3898.43734

Aliphatic index  66.85714286

Isoelectric point  4.184373704

Charge (pH=7)   -1.062914258

Topological polar surface area  1483.03

Aromaticity  0.171428571

Average rotatable bonds  3.4

Number of hydrogen bond donors  53

Number of hydrogen bond acceptors  53

X logP energy  -12.914

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.