SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02392

Signal sequence   MDMRVPAQLLGLLLLWLSGARC

Length  22

Organism  Homo sapiens (Human)

UniProt ID  P01593,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  8JBV,

Predicted Structure ID  SPKB02392.cif

Structure  SPKB02392.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2457.05144

Aliphatic index  146.3636364

Isoelectric point  8.54983383

Charge (pH=7)   0.936449445

Topological polar surface area  905.84

Aromaticity  0.045454545

Average rotatable bonds  3.636363636

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  31

X logP energy  -4.21436

Hydropathy 



Literature Information


Title  Structural and idiotypic characterization of the L chains of human IgM autoantibodies with different specificities.

DOI  NA,

Publication Year  1989

PubMed ID  2496160,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.