SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02255

Signal sequence   MHFSSSSTLFTCITLIPLVCLILHASLSDA

Length  30

Organism  Armoracia rusticana (Horseradish) (Armoracia laphatifolia)

UniProt ID  P00433,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02255.cif

Structure  SPKB02255.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3221.83544

Aliphatic index  133.3333333

Isoelectric point  6.48042113

Charge (pH=7)   -0.943700466

Topological polar surface area  1175.16

Aromaticity  0.066666667

Average rotatable bonds  3.366666667

Number of hydrogen bond donors  44

Number of hydrogen bond acceptors  46

X logP energy  -10.325

Hydropathy 



Literature Information


Title  Covalent structure of the glycoprotein horseradish peroxidase (EC 1.11.1.7).

DOI  10.1016/0014-5793(76)80804-6,

Publication Year  1976

PubMed ID  1001465,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.