SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02137

Signal sequence   MAVASRKLGALVLVAVLCLSLPTGCLS

Length  27

Organism  Tanacetum cinerariifolium (Dalmatian daisy) (Chrysanthemum cinerariifolium)

UniProt ID  H6U1I8,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02137.cif

Structure  SPKB02137.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2686.36864

Aliphatic index  158.8888889

Isoelectric point  8.828181491

Charge (pH=7)   1.873736522

Topological polar surface area  979.97

Aromaticity  0

Average rotatable bonds  3.222222222

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  37

X logP energy  -7.83893

Hydropathy 



Literature Information


Title  Identification and characterization of a GDSL lipase-like protein that catalyzes the ester-forming reaction for pyrethrin biosynthesis in Tanacetum cinerariifolium- a new target for plant protection.

DOI  10.1111/j.1365-313X.2012.04980.x,

Publication Year  2012

PubMed ID  22385412,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.