SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02133

Signal sequence   MKGFFAGVVAAATLAVASA

Length  19

Organism  Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines)

UniProt ID  G4ZHR2,

Motif  1..19



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02133.cif

Structure  SPKB02133.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1782.13104

Aliphatic index  103.1578947

Isoelectric point  9.700002532

Charge (pH=7)   0.997689266

Topological polar surface area  653.6

Aromaticity  0.105263158

Average rotatable bonds  2.894736842

Number of hydrogen bond donors  23

Number of hydrogen bond acceptors  24

X logP energy  -5.7185

Hydropathy 



Literature Information


Title  A Phytophthora sojae Glycoside Hydrolase 12 Protein Is a Major Virulence Factor during Soybean Infection and Is Recognized as a PAMP.

DOI  10.1105/tpc.15.00390,

Publication Year  2015

PubMed ID  26163574,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.