SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02123

Signal sequence   MNMSCKFEIVLLVSWWLLLVLVFGVESSMF

Length  30

Organism  Dianthus caryophyllus (Carnation) (Clove pink)

UniProt ID  E3W9M2,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02123.cif

Structure  SPKB02123.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3522.34044

Aliphatic index  139.3333333

Isoelectric point  4.258107901

Charge (pH=7)   -1.060735205

Topological polar surface area  1163.43

Aromaticity  0.166666667

Average rotatable bonds  3.8

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  43

X logP energy  -1.24

Hydropathy 



Literature Information


Title  A novel glucosylation reaction on anthocyanins catalyzed by acyl-glucose-dependent glucosyltransferase in the petals of carnation and delphinium.

DOI  10.1105/tpc.110.077487,

Publication Year  2010

PubMed ID  20971893,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.