SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02122

Signal sequence   MRFTLKTTAIVSAAALLAGFGPPPRA

Length  26

Organism  Castellaniella defragrans (strain DSM 12143 / CCUG 39792 / 65Phen) (Alcaligenes defragrans)

UniProt ID  E1XUJ2,

Motif  1..26



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  5I3T,

Predicted Structure ID  SPKB02122.cif

Structure  SPKB02122.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2658.20054

Aliphatic index  94.23076923

Isoelectric point  12.51647815

Charge (pH=7)   2.997682643

Topological polar surface area  995.19

Aromaticity  0.076923077

Average rotatable bonds  3.076923077

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  35

X logP energy  -8.71176

Hydropathy 



Literature Information


Title  Linalool dehydratase-isomerase, a bifunctional enzyme in the anaerobic degradation of monoterpenes.

DOI  10.1074/jbc.M109.084244,

Publication Year  2010

PubMed ID  20663876,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.