SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02116

Signal sequence   MTSNNRHLFQATCLVLLLLHAAFHGGALG

Length  29

Organism  Patiria pectinifera (Starfish) (Asterina pectinifera)

UniProt ID  C9K4X8,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02116.cif

Structure  SPKB02116.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3106.65664

Aliphatic index  117.9310345

Isoelectric point  8.571880956

Charge (pH=7)   1.208733545

Topological polar surface area  1216.02

Aromaticity  0.068965517

Average rotatable bonds  3.448275862

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  42

X logP energy  -10.97563

Hydropathy 



Literature Information


Title  A relaxin-like peptide purified from radial nerves induces oocyte maturation and ovulation in the starfish, Asterina pectinifera.

DOI  10.1073/pnas.0900243106,

Publication Year  2009

PubMed ID  19470645,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.