Peptide-Information

General Information

SPKB ID SPKB02113

Signal sequence MKRQLYLYVIFVVVELMVFTTKGYS

Length 25

Organism Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3)

UniProt ID C6XZB6,

Motif 1..25

Activity Information

Pathway Sec

Natural/Artificial Natural

Subcellular location Periplasmic space

Secretion efficiency NA

Type Sec/SPI

Structure Information

PDB ID NA,

Predicted Structure ID SPKB02113.cif

Structure SPKB02113.cif

Very high (pLDDT > 90)

Confident (90 > pLDDT > 70)

Low (70 > pLDDT > 50)

Very low (pLDDT < 50)

Loading PAE…

Expected Position Error (Ångströms)

Physicochemical Information

Molecular weight 3028.70444

Aliphatic index 120.4

Isoelectric point 9.736901871

Charge (pH=7) 1.9966148

Topological polar surface area 1077.43

Aromaticity 0.2

Average rotatable bonds 3.96

Number of hydrogen bond donors 39

Number of hydrogen bond acceptors 39

X logP energy -2.62873

Hydropathy

Literature Information

Title Isolation and expression in Escherichia coli of hepB and hepC, genes coding for the glycosaminoglycan-degrading enzymes heparinase II and heparinase III, respectively, from Flavobacterium heparinum.

DOI 10.1128/aem.62.8.2723-2734.1996,

Publication Year 1996

PubMed ID 8702264,

Patent ID NA,