SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02111

Signal sequence   MRAVHLLALGAGLAAASPALA

Length  21

Organism  Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1) (Methylobacterium extorquens)

UniProt ID  C5B120,

Motif  1..21



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  6OC5,

Predicted Structure ID  SPKB02111.cif

Structure  SPKB02111.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1974.39514

Aliphatic index  144.7619048

Isoelectric point  10.5517587

Charge (pH=7)   1.088890079

Topological polar surface area  747.34

Aromaticity  0

Average rotatable bonds  2.904761905

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  26

X logP energy  -6.11653

Hydropathy 



Literature Information


Title  A catalytic role of XoxF1 as La3+-dependent methanol dehydrogenase in Methylobacterium extorquens strain AM1.

DOI  10.1371/journal.pone.0050480,

Publication Year  2012

PubMed ID  23209751,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.