SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02106

Signal sequence   MEQICLIILLISKALSVGA

Length  19

Organism  Salmo salar (Atlantic salmon)

UniProt ID  C0H9B6,

Motif  1..19



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02106.cif

Structure  SPKB02106.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2015.54064

Aliphatic index  190

Isoelectric point  6.231833229

Charge (pH=7)   -0.062510328

Topological polar surface area  733.99

Aromaticity  0

Average rotatable bonds  3.684210526

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  27

X logP energy  -3.2525

Hydropathy 



Literature Information


Title  Cupulin is a zona pellucida-like domain protein and major component of the cupula from the inner ear.

DOI  10.1371/journal.pone.0111917,

Publication Year  2014

PubMed ID  25369234,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.