SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02087

Signal sequence   MERRTLLVVLLVCSCVVAAAAEASP

Length  25

Organism  Hyas araneus (Atlantic lyre crab) (Great spider crab)

UniProt ID  A6XMY0,

Motif  1..25



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02087.cif

Structure  SPKB02087.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2602.16424

Aliphatic index  140.4

Isoelectric point  6.259046796

Charge (pH=7)   -0.12242151

Topological polar surface area  1012.02

Aromaticity  0

Average rotatable bonds  3.32

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  36

X logP energy  -8.66216

Hydropathy 



Literature Information


Title  Arasin 1, a proline-arginine-rich antimicrobial peptide isolated from the spider crab, Hyas araneus.

DOI  10.1016/j.dci.2007.06.002,

Publication Year  2008

PubMed ID  17658600,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.