SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02080

Signal sequence   MVKSRKISILLAVAMLVSIMIPTTAFA

Length  27

Organism  Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (Clostridium thermocellum)

UniProt ID  A3DH67,

Motif  1..27



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  1L1Y,

Predicted Structure ID  SPKB02080.cif

Structure  SPKB02080.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2905.69564

Aliphatic index  148.1481481

Isoelectric point  11.82305527

Charge (pH=7)   2.99739092

Topological polar surface area  1026.22

Aromaticity  0.037037037

Average rotatable bonds  3.592592593

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  39

X logP energy  -5.35863

Hydropathy 



Literature Information


Title  Cloning and DNA sequence of the gene coding for Clostridium thermocellum cellulase Ss (CelS), a major cellulosome component.

DOI  10.1128/jb.175.5.1293-1302.1993,

Publication Year  1993

PubMed ID  8444792,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.