SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02060

Signal sequence   MFPRLPTLALGALLLASTPLLA

Length  22

Organism  Pseudomonas sp

UniProt ID  A0A0A1H8I4,

Motif  1..22



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02060.cif

Structure  SPKB02060.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2279.85274

Aliphatic index  160

Isoelectric point  10.55000222

Charge (pH=7)   0.997980988

Topological polar surface area  770.64

Aromaticity  0.045454545

Average rotatable bonds  3.090909091

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  28

X logP energy  -2.80953

Hydropathy 



Literature Information


Title  Enzymatic characterization and gene identification of aconitate isomerase, an enzyme involved in assimilation of trans-aconitic acid, from Pseudomonas sp. WU-0701.

DOI  10.1111/febs.13494,

Publication Year  2015

PubMed ID  26293748,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.