SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB02042

Signal sequence   SLSPVDNILLLQLLGTAAAVLIGASKNDGGVTRVEDRSYSEILFSLNPLSDTRLRLKHVVAVAGGAASSVTDYYLSLSRNVPEGVWYMATSIDGEIAWLGLIADVLRGVFLLGEAARESV

Length  120

Organism  Artificial

UniProt ID  NA,

Motif  1..120



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Artificial

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB02042.cif

Structure  SPKB02042.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  12718.54864

Aliphatic index  123.5

Isoelectric point  4.539063605

Charge (pH=7)   -3.901345388

Topological polar surface area  5190.86

Aromaticity  0.066666667

Average rotatable bonds  3.475

Number of hydrogen bond donors  184

Number of hydrogen bond acceptors  172

X logP energy  -49.87821

Hydropathy 



Literature Information


Title  SYNTHETIC SIGNAL PEPTIDES FOR DIRECTING SECRETION OF HETEROLOGOUS PROTEINS IN YEAST

DOI  NA,

Publication Year  2024

PubMed ID  NA,

Patent ID  US20240174722A1,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.