SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB01888

Signal sequence   APVNTTTEDETAQIPAEAVIGYSDLEGDFDVAVLPFSNSTNNGLLFINTTIASIAAKEEGVSLKREEG

Length  68

Organism  Artificial

UniProt ID  NA,

Motif  1..68



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Artificial

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB01888.cif

Structure  SPKB01888.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  7142.80854

Aliphatic index  90.44117647

Isoelectric point  3.639786123

Charge (pH=7)   -8.987472575

Topological polar surface area  3069.72

Aromaticity  0.058823529

Average rotatable bonds  3.441176471

Number of hydrogen bond donors  102

Number of hydrogen bond acceptors  103

X logP energy  -36.25983

Hydropathy 



Literature Information


Title  SYNTHETIC SIGNAL PEPTIDES FOR DIRECTING SECRETION OF HETEROLOGOUS PROTEINS IN YEAST

DOI  NA,

Publication Year  2024

PubMed ID  NA,

Patent ID  US20240174722A1,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.