SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB01253

Signal sequence   QPIDDTESQTTSVNLMADDTESAFATQTNSGGLDVVGLISMAEEG

Length  45

Organism  Artificial

UniProt ID  NA,

Motif  1..45



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Artificial

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB01253.cif

Structure  SPKB01253.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4646.93764

Aliphatic index  71.55555556

Isoelectric point  2.974098442

Charge (pH=7)   -8.992682789

Topological polar surface area  2108.61

Aromaticity  0.022222222

Average rotatable bonds  3.444444444

Number of hydrogen bond donors  70

Number of hydrogen bond acceptors  73

X logP energy  -30.5854

Hydropathy 



Literature Information


Title  SYNTHETIC SIGNAL PEPTIDES FOR DIRECTING SECRETION OF HETEROLOGOUS PROTEINS IN YEAST

DOI  NA,

Publication Year  2024

PubMed ID  NA,

Patent ID  US20240174722A1,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.