SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB00826

Signal sequence   GAPTSVGIVGLLLTTAMA

Length  18

Organism  Artificial

UniProt ID  NA,

Motif  1..18



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Artificial

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB00826.cif

Structure  SPKB00826.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1672.01294

Aliphatic index  135.5555556

Isoelectric point  6.099999998

Charge (pH=7)   -0.002015701

Topological polar surface area  630.15

Aromaticity  0

Average rotatable bonds  2.833333333

Number of hydrogen bond donors  22

Number of hydrogen bond acceptors  24

X logP energy  -6.5158

Hydropathy 



Literature Information


Title  FLAVIVIRUS SIGNAL PEPTIDES, VACCINE CONSTRUCTS, AND METHODS THEREFOR

DOI  NA,

Publication Year  2023

PubMed ID  NA,

Patent ID  US20230272405A1,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.