SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB00728

Signal sequence   MRNLGLLEITLLCSLFVYFRIDSVSS

Length  26

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9FZ59,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB00728.cif

Structure  SPKB00728.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2990.56894

Aliphatic index  142.3076923

Isoelectric point  6.314962198

Charge (pH=7)   -0.062625846

Topological polar surface area  1153.69

Aromaticity  0.115384615

Average rotatable bonds  3.807692308

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  40

X logP energy  -7.96146

Hydropathy 



Literature Information


Title  Plant defense signal peptides

DOI  NA,

Publication Year  2014

PubMed ID  NA,

Patent ID  US8686224B2,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.