SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB00727

Signal sequence   MKNLGGLFKILLLFFCLFLSTHII

Length  24

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9SSL9,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB00727.cif

Structure  SPKB00727.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2782.52724

Aliphatic index  162.5

Isoelectric point  9.677346754

Charge (pH=7)   2.026328607

Topological polar surface area  896.89

Aromaticity  0.166666667

Average rotatable bonds  3.875

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  33

X logP energy  0.3985

Hydropathy 



Literature Information


Title  Plant defense signal peptides

DOI  NA,

Publication Year  2014

PubMed ID  NA,

Patent ID  US8686224B2,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.