SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB00495

Signal sequence   SDPDPLQDFCVADLDGKAVSVNGHTCKPMS

Length  30

Organism  Hordeum vulgare

UniProt ID  NA,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  2ET7,

Predicted Structure ID  SPKB00495.cif

Structure  SPKB00495.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3147.49664

Aliphatic index  61.66666667

Isoelectric point  4.154905374

Charge (pH=7)   -3.033413688

Topological polar surface area  1315.17

Aromaticity  0.033333333

Average rotatable bonds  3.3

Number of hydrogen bond donors  44

Number of hydrogen bond acceptors  48

X logP energy  -16.7098

Hydropathy 



Literature Information


Title  Plant secretory signal peptides and nectarins

DOI  NA,

Publication Year  1999

PubMed ID  NA,

Patent ID  US5939288A,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.