SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB00494

Signal sequence   MGYSKTLVAGLFAMLLLAPAVLATDPDPLQDFCVADLDGKAVSVNGHTCKPMSE

Length  54

Organism  Triticum aestivum

UniProt ID  NA,

Motif  1..54



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  1FI2,

Predicted Structure ID  SPKB00494.cif

Structure  SPKB00494.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5623.57034

Aliphatic index  97.59259259

Isoelectric point  4.290888412

Charge (pH=7)   -3.032784014

Topological polar surface area  2128.79

Aromaticity  0.055555556

Average rotatable bonds  3.314814815

Number of hydrogen bond donors  72

Number of hydrogen bond acceptors  79

X logP energy  -19.1649

Hydropathy 



Literature Information


Title  Plant secretory signal peptides and nectarins

DOI  NA,

Publication Year  1999

PubMed ID  NA,

Patent ID  US5939288A,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.