SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB00429

Signal sequence   RKVPRGPDPIHN

Length  12

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  NA,

Motif  1..12



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB00429.cif

Structure  SPKB00429.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1385.59184

Aliphatic index  56.66666667

Isoelectric point  11.47971465

Charge (pH=7)   2.089038218

Topological polar surface area  615.94

Aromaticity  0

Average rotatable bonds  3.416666667

Number of hydrogen bond donors  20

Number of hydrogen bond acceptors  19

X logP energy  -6.44536

Hydropathy 



Literature Information


Title  Tea signal peptide drought-resistant inducer and application thereof

DOI  NA,

Publication Year  2024

PubMed ID  NA,

Patent ID  CN119157128A,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.