SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB00365

Signal sequence   MRFPSIFTAVLFAASSALAAPVNTTTEDETAQIPAEAVIGYSDLEGDFDVAVLPFSNSTNNGLLFINTTIASIAAKEEGVSLEKREAEA

Length  89

Organism  Artificial

UniProt ID  NA,

Motif  1..89



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Artificial

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  6KRL,

Predicted Structure ID  SPKB00365.cif

Structure  SPKB00365.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  9339.40084

Aliphatic index  93.37078652

Isoelectric point  3.746894103

Charge (pH=7)   -8.985700764

Topological polar surface area  3852.15

Aromaticity  0.078651685

Average rotatable bonds  3.393258427

Number of hydrogen bond donors  130

Number of hydrogen bond acceptors  131

X logP energy  -42.30366

Hydropathy 



Literature Information


Title  Method for identifying signal peptide with secretion function by using galactosidase

DOI  NA,

Publication Year  2023

PubMed ID  NA,

Patent ID  CN116769816A,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.