SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB00236

Signal sequence   KLSHRIAAMAATAGITVAAFAAPASASDF

Length  29

Organism  Artificial

UniProt ID  NA,

Motif  1..29



Activity Information


Pathway  NA

Natural/Artificial  Artificial

Subcellular location  Extracellular environment

Secretion efficiency  Collagen V-B: 75mg/L

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB00236.cif

Structure  SPKB00236.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2818.24334

Aliphatic index  88.27586207

Isoelectric point  9.697024

Charge (pH=7)   1.089041529

Topological polar surface area  1124.38

Aromaticity  0.068965517

Average rotatable bonds  3

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  40

X logP energy  -13.06673

Hydropathy 



Literature Information


Title  Signal peptide and method for promoting secretory expression of collagen in corynebacterium glutamicum

DOI  NA,

Publication Year  2022

PubMed ID  NA,

Patent ID  CN114480409A,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.