SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB00220

Signal sequence   SEQSQLDDSTID

Length  12

Organism  Artificial

UniProt ID  NA,

Motif  1..12



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Artificial

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB00220.cif

Structure  SPKB00220.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1337.31644

Aliphatic index  65

Isoelectric point  3.260468734

Charge (pH=7)   -3.998901125

Topological polar surface area  699.72

Aromaticity  0

Average rotatable bonds  3.833333333

Number of hydrogen bond donors  23

Number of hydrogen bond acceptors  23

X logP energy  -10.9991

Hydropathy 



Literature Information


Title  Signal peptide related sequence and application thereof in protein synthesis

DOI  NA,

Publication Year  2021

PubMed ID  NA,

Patent ID  CN113481226A,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.