SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB00219

Signal sequence   LSSTVVSAV

Length  9

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  NA,

Motif  69..77



Activity Information


Pathway  TOC/TIC

Natural/Artificial  Natural

Subcellular location  Chloroplast

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB00219.cif

Structure  SPKB00219.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  861.99094

Aliphatic index  151.1111111

Isoelectric point  6.099999998

Charge (pH=7)   -0.002015701

Topological polar surface area  377.04

Aromaticity  0

Average rotatable bonds  2.888888889

Number of hydrogen bond donors  14

Number of hydrogen bond acceptors  14

X logP energy  -5.3316

Hydropathy 



Literature Information


Title  Signal peptide for regulating accurate positioning of protein in organelle as well as coding sequence and application of signal peptide

DOI  NA,

Publication Year  2021

PubMed ID  NA,

Patent ID  CN113150072A,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.