SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB00167

Signal sequence   MQPLVSTSAAAAAIPSPPPPALTLPPPRRRIPPPLTAGALLCNRTGSGHASPRGRRPLPPPAMSHPLSSEPHALEQRAVV

Length  80

Organism  Oryza sativa

UniProt ID  NA,

Motif  1..80



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Amyloplast

Secretion efficiency  Degrade 50% of pollen grain starch

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB00167.cif

Structure  SPKB00167.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  8242.62644

Aliphatic index  79.5

Isoelectric point  12.50004969

Charge (pH=7)   6.212260611

Topological polar surface area  3223.08

Aromaticity  0

Average rotatable bonds  2.95

Number of hydrogen bond donors  107

Number of hydrogen bond acceptors  112

X logP energy  -37.40804

Hydropathy 



Literature Information


Title  Powder protein transport signal peptide and application thereof in pollen fertility regulation

DOI  NA,

Publication Year  2020

PubMed ID  NA,

Patent ID  CN111072759A,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.