SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB00162

Signal sequence   MAQQLSAPFRAAAAAGSRASAAAADPAKVLRLRSAGSAQFTSIAASSSFARNIEPLR

Length  57

Organism  Oryza sativa

UniProt ID  NA,

Motif  1..57



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Amyloplast

Secretion efficiency  Degrade 50% of pollen grain starch

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB00162.cif

Structure  SPKB00162.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5746.50694

Aliphatic index  77.71929825

Isoelectric point  12.50562841

Charge (pH=7)   4.999891005

Topological polar surface area  2513.23

Aromaticity  0.052631579

Average rotatable bonds  3.263157895

Number of hydrogen bond donors  90

Number of hydrogen bond acceptors  82

X logP energy  -34.86798

Hydropathy 



Literature Information


Title  Rice powder protein transport signal peptide and application thereof in pollen fertility regulation and control

DOI  NA,

Publication Year  2020

PubMed ID  NA,

Patent ID  CN110642929A,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.