SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB00159

Signal sequence   MKSLILNIISVTLAITSTAASAPVESIFANQPDSSLTDTNDGVGVGMSTIKEEDFGKHFVENQILDEAVIMSLKLRKGVNLFFLDDIGLATELIGNKIAQIEAIDLSERLAQNWTNIRKNRLFGKREAEA

Length  130

Organism  Komagataella phaffii

UniProt ID  NA,

Motif  1..130



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Artificial

Subcellular location  ER

Secretion efficiency  Increase exogenous protein 5 to 7 times

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB00159.cif

Structure  SPKB00159.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  14221.26644

Aliphatic index  108.8461538

Isoelectric point  4.573460984

Charge (pH=7)   -4.892160336

Topological polar surface area  5957.48

Aromaticity  0.053846154

Average rotatable bonds  3.776923077

Number of hydrogen bond donors  203

Number of hydrogen bond acceptors  197

X logP energy  -59.76805

Hydropathy 



Literature Information


Title  Optimized pichia pastoris GS115 mating pheromone alpha-factor signal peptide and application thereof

DOI  NA,

Publication Year  2019

PubMed ID  NA,

Patent ID  CN110054667A,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.