SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB00146

Signal sequence   MKVVLFISALAATLSAAAPLEP

Length  22

Organism  Sclerotinia sclerotiorum

UniProt ID  NA,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB00146.cif

Structure  SPKB00146.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2213.70394

Aliphatic index  142.2727273

Isoelectric point  6.408795646

Charge (pH=7)   -0.000535612

Topological polar surface area  780.85

Aromaticity  0.045454545

Average rotatable bonds  3.090909091

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  29

X logP energy  -4.3916

Hydropathy 



Literature Information


Title  Method for identifying signal peptide with secretion function based on pathogen-related molecular mode protein

DOI  NA,

Publication Year  2018

PubMed ID  NA,

Patent ID  CN108300733A,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.