SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB00081

Signal sequence   MSQCIDGFKHVCSSFFRCFD

Length  20

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  NA,

Motif  1..20



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Tonoplast

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB00081.cif

Structure  SPKB00081.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2357.71974

Aliphatic index  34

Isoelectric point  7.180325252

Charge (pH=7)   -0.096436134

Topological polar surface area  911.2

Aromaticity  0.2

Average rotatable bonds  3.8

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  34

X logP energy  -8.99383

Hydropathy 



Literature Information


Title  Tonoplast localization sequence and its application

DOI  NA,

Publication Year  2013

PubMed ID  NA,

Patent ID  CN103254293A,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.