SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB00079

Signal sequence   MSQCIDGFKHVCSSFFRCF

Length  19

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  NA,

Motif  1..19



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Tonoplast

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB00079.cif

Structure  SPKB00079.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2242.63114

Aliphatic index  35.78947368

Isoelectric point  8.061162661

Charge (pH=7)   0.903117382

Topological polar surface area  844.8

Aromaticity  0.210526316

Average rotatable bonds  3.789473684

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  32

X logP energy  -7.95333

Hydropathy 



Literature Information


Title  Tonoplast localization sequence and its application

DOI  NA,

Publication Year  2013

PubMed ID  NA,

Patent ID  CN103254293A,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.