SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB00077

Signal sequence   MADWAMHHYLLLANQQRHRALADVAVRRRQLLLDSGRVFMLLGAVILMHMLTTTGGG

Length  57

Organism  Oryza sativa

UniProt ID  NA,

Motif  1..57



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Apoplast

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB00077.cif

Structure  SPKB00077.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  6427.64294

Aliphatic index  114.7368421

Isoelectric point  11.81122048

Charge (pH=7)   3.362089833

Topological polar surface area  2580.24

Aromaticity  0.052631579

Average rotatable bonds  3.771929825

Number of hydrogen bond donors  93

Number of hydrogen bond acceptors  85

X logP energy  -20.62538

Hydropathy 



Literature Information


Title  N-terminal XA27 signal anchor and its use for localization of fusion proteins

DOI  NA,

Publication Year  2010

PubMed ID  NA,

Patent ID  CN101910402A,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.