SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB00050

Signal sequence   MCLERACALAMKYLLPTAAAGLLLLAAQPAMA

Length  32

Organism  Erwinia carotovora

UniProt ID  NA,

Motif  1..32



Activity Information


Pathway  Sec

Natural/Artificial  Artificial

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  1QOK,

Predicted Structure ID  SPKB00050.cif

Structure  SPKB00050.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3291.10804

Aliphatic index  128.75

Isoelectric point  8.221180783

Charge (pH=7)   0.874661231

Topological polar surface area  1156.61

Aromaticity  0.03125

Average rotatable bonds  3.28125

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  44

X logP energy  -6.39073

Hydropathy 



Literature Information


Title  Small peptide strengthening mold sequence of strong secretory signal peptide and application thereof

DOI  NA,

Publication Year  2013

PubMed ID  NA,

Patent ID  CN103254277A,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.